Structure of PDB 7ymr Chain C

Receptor sequence
>7ymrC (length=301) Species: 1424779 (Thermocrispum sp. RD004668) [Search protein sequence]
DNPWLDARVLNMAHAGGENEAPANTLYAFKRAVKLGANMLELDVQSTKDD
QLVVIHNATVDQTTDGTGKVRDLTFEQVHELDAAYNFIPGRHAVPGEPPE
SYPLRGVRTGEKKPPPGYQPSDFAIPKLADVLEAFPRTPINIEIKGTSDA
DIPSFLHNAKLLARLLKKTGRTDFIVTSLNDLAVAKFHLLAPDIPIAPGM
AGLAAYFLLGVKPMHGTVALQIPVRYQGLEIATPEFIRRAHADGYAVHVW
FSGTAPDDEATYNRIIDSCADGLMPAYPALLERILDERGIERPGRPGVDP
C
3D structure
PDB7ymr Structural basis for the substrate specificity switching of lysoplasmalogen-specific phospholipase D from Thermocrispum sp. RD004668.
ChainC
Resolution2.69 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 KIP C H46 E50 E73 H88 H124 E175 T209 L211 L235 Q253 W282 S284 H14 E18 E41 H56 H92 E143 T177 L179 L203 Q221 W250 S252
Gene Ontology
Molecular Function
GO:0008081 phosphoric diester hydrolase activity
GO:0046872 metal ion binding
Biological Process
GO:0006629 lipid metabolic process

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Molecular Function
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Biological Process
External links
PDB RCSB:7ymr, PDBe:7ymr, PDBj:7ymr
PDBsum7ymr
PubMed36307380
UniProtA0A0U4VTN7

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