Structure of PDB 7yfi Chain C

Receptor sequence
>7yfiC (length=745) Species: 10116 (Rattus norvegicus) [Search protein sequence]
KIVNIGAVLSTRKHEQMFREAVNQANKRHGSWKIQLNATSVTHKPNAIQM
ALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLGLTTR
MSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYNWNHIILLVSDDHEGR
AAQKRLETLLEERESKAEKVLQFDPGTKNVTALLMEARELEARVIILSAS
EDDAATVYRAAAMLNMTGSGYVWLVGEREISGNALRYAPDGIIGLQLING
KNESAHISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRV
LMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYNGTHVIP
NDRKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTMSDGTCKEEF
TVNGDPVKKVICTGPNDTSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTY
EVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINNERA
QYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVA
VMLYLLDRFSPSAMWFSWGVLLNFSARILGMVWAGFAMIIVASYTANLAA
FLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMY
RHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELF
FRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQEC
3D structure
PDB7yfi Distinct structure and gating mechanism in diverse NMDA receptors with GluN2C and GluN2D subunits.
ChainC
Resolution3.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GLY C F484 T518 R523 S687 S688 F460 T494 R499 S634 S635
Gene Ontology
Molecular Function
GO:0005216 monoatomic ion channel activity
GO:0015276 ligand-gated monoatomic ion channel activity
GO:0038023 signaling receptor activity
Biological Process
GO:0006811 monoatomic ion transport
Cellular Component
GO:0016020 membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7yfi, PDBe:7yfi, PDBj:7yfi
PDBsum7yfi
PubMed36959261
UniProtP35439|NMDZ1_RAT Glutamate receptor ionotropic, NMDA 1 (Gene Name=Grin1)

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