Structure of PDB 7vaz Chain C

Receptor sequence

>7vazC (length=215) Species: 10090 (Mus musculus)

QAVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLI
GRTNNRVPGVPARFSGSLIGDKAALTITGAQTEDEAIYFCALWYSNHFIF
GSGTKVTVLKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQ
WKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVT
HQGLSSPVTKSFNRG

3D structure

• PDB: 7vaz Site-specific GalNAc modification on a MUC1 neoantigen epitope forms a basis for high-affinity antibody binding
• Chain: C
• Resolution: 2.73 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	C	Y34 N36 R52 W93	Y34 N36 R52 W93

External links

• PDB: RCSB:7vaz, PDBe:7vaz, PDBj:7vaz
• PDBsum: 7vaz