Structure of PDB 7tgm Chain C

Receptor sequence
>7tgmC (length=592) Species: 35619 (Streptomyces griseoflavus) [Search protein sequence]
MSLTDAVAHLSPERWEEANRLLVRKALAEFAHERLFTPEPADGQDGRYVV
RSDDGLTSYRFTAVRRALDHWQVDAGSITRTRDGAELPLAALDFFIELRH
TLGLSDEILPVYLEEISSTLSGTCYKLTKPQVTAAGLLEGGFQALESGMT
EGHPCFVANNGRLGFGVDEYLAYAPETAHPVRLVWLAAHRSRAAFTAGAG
IDYASFVRQELGEETVERFDGVLRGRGLDPADYLLIPVHPWQWWNKLSVT
FAAEVARQNLVCLGESDDEYLAQQSIRTFFNATHPEKHYVKTALSVLNMG
FMRGLSAAYMEATPAINDWLDRLIDNDPVLKSTGLSIIRERAAVGYRHLE
YEAATDRYSPYRKMLAALWRESPVPALRDGESLTTMAALVHVDHEGRSVA
GELIARSGLAPTAWLRHYLRAYYTPLLHSFYAYDLAFMPHGENTILVLKD
GVVQRAVYKDIAEEIVVMDPDAVLPPEVRRVRAEVPEDMKLLSIFTDVFD
CFFRFLAAGLATEEVLAEDDFWRTVAEVTREYQEAHPELDDRFRQYDLFA
PEFALSCLNRLQLRDNRQMVDLADPSAALQLVGTLRNPLAGL
3D structure
PDB7tgm An acyl-adenylate mimic reveals the structural basis for substrate recognition by the iterative siderophore synthetase DesD.
ChainC
Resolution2.5 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 I3U C M299 R303 D497 M299 R303 D497
BS02 LMS C G152 H153 Q274 S275 N298 M299 R303 H440 E442 G152 H153 Q274 S275 N298 M299 R303 H440 E442
BS03 MG C E442 N443 D460 E442 N443 D460
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Sun Dec 1 01:45:44 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '7tgm', asym_id = 'C', title = 'An acyl-adenylate mimic reveals the structural b...ion by the iterative siderophore synthetase DesD.'
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='7tgm', asym_id='C', title='An acyl-adenylate mimic reveals the structural b...ion by the iterative siderophore synthetase DesD.')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0019290', uniprot = '', pdbid = '7tgm', asym_id = 'C'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0019290', uniprot='', pdbid='7tgm', asym_id='C')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>