Structure of PDB 7sym Chain C

Receptor sequence
>7symC (length=213) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]
VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVS
LADLQNDEVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTM
IEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMME
IMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKK
PKFELGKLMELHG
3D structure
PDB7sym Comprehensive structural overview of the HCV IRES-mediated translation initiation pathway
ChainC
Resolution4.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna C P24 S112 V114 K115 Q118 M120 H124 R136 N148 Q149 I150 R151 Y155 Q157 Q159 Q160 R162 R165 Q202 I204 Y205 K214 K216 P4 S92 V94 K95 Q98 M100 H104 R116 N128 Q129 I130 R131 Y135 Q137 Q139 Q140 R142 R145 Q182 I184 Y185 K194 K196
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
GO:0030154 cell differentiation
Cellular Component
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7sym, PDBe:7sym, PDBj:7sym
PDBsum7sym
PubMed
UniProtG1SS70|RS3A_RABIT Small ribosomal subunit protein eS1 (Gene Name=RPS3A)

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