Structure of PDB 7n08 Chain C

Receptor sequence

>7n08C (length=232) Species: 9606 (Homo sapiens) [Search protein sequence]

VQLVESGGGLVQPGRSLRLSCAASGFTFNDYAMHWVRQAPGKGLEWVSGI
SWDSSSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDMALYYCVKGRD
YYDSGGYFTVAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAAL
GCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSS
LGTQTYICNVNHKPSNTKVDKKVEPKSCGRLV

3D structure

PDB

7n08 Conformational plasticity of the HIV-1 gp41 immunodominant region is recognized by multiple non-neutralizing antibodies.

Chain

Resolution

2.0 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	C	W47 G50 W52A D53 S55 S56 G58 Y100D F100E	W46 G49 W52 D53 S55 S56 G58 Y107 F108

External links

PDB	RCSB:7n08, PDBe:7n08, PDBj:7n08
PDBsum	7n08
PubMed	35361878

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