Structure of PDB 7lnp Chain C

Receptor sequence
>7lnpC (length=565) Species: 484018 (Phocaeicola plebeius DSM 17135) [Search protein sequence]
DSTVSLKGTDVFKADSASIAQNYTIPEWFKDAKFGIFIHWGVYSVPAYGS
EWYSRWMYKEGHPINKYHVQTYGPLTKFGYKDFIPMFKAENFNADEWLAV
VKSSGAQYIVPVAEHHDGFAMYSSTFNKWNAVDMGPKRDIIGELKEATKK
AGLRFGLSSHRCENAWFYEYGMETPSDVQDTTITLYGERLHEPEGQGMTP
YCGKYEGSNERSRRQFLMHTYELIDKYQPELIWFNWTVGKYPFQPTFYKF
MAYYYNSALDWNKEVVVNTKFGYGDNIQVFDIERGKSDRIREYPWQTDTS
VGKKSWSYCVGEENKSPDHIIDDFVDIVSKNGNLLLNIGPKADGTITDEQ
KNVLAEIGKWLKTNGEAIYGSRPWVIASEGHNAGTAGYMTDNTKTEYTAD
DIRFTTCDNNLYAVSLAWTDGSVTIKSLATKYCRNVEIESVEMLGSSEKI
DYKMTDEGLVVNFPKNKPTEYAHVFKIKLKGVVVSKPLYDKVDNGCLITV
RVANHNAEDANVTLKSVVDGNEVSTQVAVKAKSEQWVKMQNKDVKSFDDM
SCKFYFNDNLTYENE
3D structure
PDB7lnp Metabolism of a hybrid algal galactan by members of the human gut microbiome.
ChainC
Resolution2.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA C D347 D351 L445 Y500 D318 D322 L416 Y471
BS02 Y9Y C H68 E80 W81 H144 H145 N264 W265 K299 E312 D327 W335 H39 E51 W52 H115 H116 N235 W236 K270 E283 D298 W306
Gene Ontology
Molecular Function
GO:0004560 alpha-L-fucosidase activity
Biological Process
GO:0005975 carbohydrate metabolic process
GO:0006004 fucose metabolic process

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Molecular Function
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Biological Process
External links
PDB RCSB:7lnp, PDBe:7lnp, PDBj:7lnp
PDBsum7lnp
PubMed35289327
UniProtB5CYA5

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