Structure of PDB 7lgd Chain C

Receptor sequence
>7lgdC (length=276) Species: 9606 (Homo sapiens) [Search protein sequence]
GSHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSDAASPREEPRAP
WIEQEGPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQSMYG
CDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAA
REAEQRRAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEAT
LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVP
SGEEQRYTCHVQHEGLPKPLTLRWEP
3D structure
PDB7lgd CD8 + T cells specific for an immunodominant SARS-CoV-2 nucleocapsid epitope cross-react with selective seasonal coronaviruses.
ChainC
Resolution2.88 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide C Y7 N63 I66 Y67 A69 Q70 T73 E76 S77 N80 Y84 Y99 D114 T143 K146 W147 E152 Q155 R156 Y159 W167 Y171 Y7 N63 I66 Y67 A69 Q70 T73 E76 S77 N80 Y84 Y99 D114 T143 K146 W147 E152 Q155 R156 Y159 W167 Y171
External links
PDB RCSB:7lgd, PDBe:7lgd, PDBj:7lgd
PDBsum7lgd
PubMed33945786
UniProtP01889|HLAB_HUMAN HLA class I histocompatibility antigen, B alpha chain (Gene Name=HLA-B)

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