Structure of PDB 7k5b Chain C

Receptor sequence
>7k5bC (length=3947) Species: 5911 (Tetrahymena thermophila) [Search protein sequence]
PLVWTQLKQTGTTQPTARSGHTIITVGKTHIMFGGLDNDKNNYKDGKIAP
NNQVFTLKLTQNNCEWRQIACQGDVPLPRCYHASCAISADKMLVFGGSYT
SNLRFNDTYILKTTSYQWSKPANQISGGEPKNAESKIGAPQPRYGHSATF
FEGKVYIFGGHGGINYQRLAFNDLYVLETENFEWTRLEPKGNPPDPRGGH
SAAMMANKPQLMIFGGWSFTSQYSNIMIYDIEKDEWVDPEIAHEIPKWNL
SGIMAPSIPSWKYFIFGGSVGSFEEGGNRTNSRFVDDSFVLDIDTLSWSS
INLEADETSKAVCKPRPRESASIFYDSGESRAIVFGGWANNWLNDLWALN
VSTITGPPIFSIKPALGPLTGKTKVLIEGDGFKDTQNISVKFSGGKLEKE
VNGTFVNEKEISCETPTFDYPRSVEVTVCMNKGDYTITKSAFTYNTKADK
TIAYGPGLLTENLIGVQTTIVIQARNGSDEFVVTIRNPAKIKKEEEVKEG
DKANTKNTIKEDEEEEGEDEEENKKKKEAEKNDLTGSAVMNYISKQLKDI
QEFIENTKENIEIRNKNISELINVMINLEKVRVKNDDDVLTLDTVEEMLN
FLKKKKDSDIKKCKKLQEEWKNLAKMAQAVKKDIQNPVKTESDKTKENIK
KFEEITLKEYANSLKKESFFIYKTGVSESFKRIGEVKQKVDEFEVQLNQY
EDFARIGSKKLMEQIRTDVSSVEKLWVRIEISEKTMDEYKKMKWGSINSM
DMEDEIKKLRKALTDLRGIDKRSNAFIGITEELKKWATFLPLLGELKDPS
MNSEDGRHWKKLKDLVKKEFDVSQELMLEIIWDLKLFDYKDGIEEITDQA
KQELKMEKALKKIIDFWRDIEFELVQHKNTDIHTLKMSEENFETLEDHQL
QINNMLLSKYVAYFEKEVEKWKYDLGSVYDVVQLLLEVQKTWSFLENLFE
VKRELPNESAQFVGIDKDMKEIMQKGCDIKNCLKFCTIEGMLKRLENIQA
QLKVCEKALNEFLDSKRRAFPRFYFVSVNDLLDILSNGNSPAKINRHMSK
IFQAIDNLQLKEDSSGGRPTLKMISCVGTEEVDFSSPRLLQGKVESYLKD
VIDTMIGTLKSVANSSFKNFQSMTRKEWLKSDPSQITLLVNNIIWSKAVE
DCFLKLQSGDINAMKLFLDESIKQLTELIGMVQGDLSKPLRQKIMCLITI
DTHSRDVVHRLINEHVRKAEEFQWQSQLKFYWVDNDAKIKIADARFVYNY
EYLGNGPRLVITPLTDRIYVTATQALHLKMGCAPAGPAGTGKTETTKDLA
NALAKACYVFNCSSEMNYESMGNIYKGLASSGCWGCFDEFNRLLPEVLSV
CSVQFKAVTDAIKQNVERFIIEGDEISLDPTCGVFITMNPGYLGRAELPE
GLKALFRPITVVVPDLELICENMLMAEGFIEAKILAKKFVTLYMLCRDLL
SKQLHYDWGLRAIKSVLVVAGGFKRSEPEIAEQALLMRALRDFNIPKIAF
QDLYVFHGLLGDLFPGINIKPKKDLDFEKIITDVCIENKLDPDPEFVLKV
VQLSELLAIRHCVFVMGPPGAGKSTTWKILAKAQDKTNKKTTLIDIDPKV
VSTKDFYGYNLPSKEWKDGLFSKMLRSLAEQPDTNPKWICLDGDLDANWI
ESMNSVMDDNKILTLANNERIPLKPHMRALFEIRDLRFATPATVSRAGIL
YISDEVGYQWRSYVKSWIKQEFSQDQEMSKNLDTLFGKYVPDTLDHIKKH
CRFLVPVSPISQVISICKSLQTLLKGDVKNLEYLFVYALIWAIGGALAEK
DSIDYRKDFSTWWKGAWKTAVKFPSKGTIFDYYVDQSGDSSKFVEWSKRL
ENKEFDPQVETMGNITVNTIETLATTEFIKSYLMVKHPSLLIGNSGCGKT
QLAKGILKEIVQAKPENYAYQLINFNYYTDSTYLQGQIEQTLEKKAGRQY
GPPGKVQLIYFIDDLNMPQLDAYDTQTAIALLRQLADYGHFYDVSKLALK
DIINTQVLAAMNPSAGSFFVNPRYQRHFWTISIPFPDNESLSLIYITFLN
GHLKRFKSTIQEYSNIIVRASLMLHQAVTQNFRKTAINFHYEFNLRHMSN
VFQGLLLSDPNKFTEPDKLIKLWIHECERTYGDRLVSTDNLKTYKENIFD
IVKKSFSKFNFSRYFGNNPENLIYCNFIAGINSDRFYDQMPNNEMEKHIS
EALKEYNDNNAFMGLVLFEDAMKHVCRICRIVLPSSGHALLVGVGGSGKQ
SLSKLASFIMGYTTFSITISATYSMVDLRNDLQQLYFKCGPKEEGILFLF
TEGQITNERFLVYINDLLSSGEIAELYTLDEKEAMINQVRAKVKGEGKPD
TRENCWNWFIDQVKKNLHMAICFSPVGDMRRRARQFPALVNCTVIDWFQP
WPYEALFNVAKSFLEPVDLGDDKVREAVVKFMPFSFTLVNDLGLKLLEQE
RRYAYTTPKSFLELISLFTNMLAQKRESLERNKERYETGLVKLKETAEQV
AIIEVEVKEKQVEAEAKKKEADAFAEVVGREKDKVEKENSKATIEADKCG
LIKQNVEAQKSSTQQDLDAAQPLVEQAKSALNSISKKDFQQAKSFASPPA
GVPEVFAATIYLLAGYFNEAIEIDKNKKPKDVSWKSSLKLMKSPEEFMEK
LLNFKDVVDANQVANVNIVKNQYLNMPSFTPEQMASKSAAAKGICSWVVN
IVKYYDVIQDVEPKRKALKEATEQLEEATVKLNEVEEVVRKLNEELNKLK
AENDKAIAERNAAISEAERCARRLNLAQRLVTALSSENERWGKSIIQLED
QLKLMVGDVLVASSFVSYSGPFNKKFRNIMINQNFMKFMKEHTIPMSPDP
NPIKILTDESTIALWNKQKLPSDSVSIENGTILTNSARYPLMIDPQLQGI
TWIREKEKANNLKILRLGSKNINRDLELSIENGYSAIIENMNERIDAILM
PIIARSFIKRGKNKIIKFAGKDLILHPNFKLFLHTKLSNPHYPPEIQAEA
ALINFTVTEAGLGDQLLSLVVARERPDLAKMKIELITQQNDFKIKLKDLE
DELLYKLANAKGDILDDIELIENLEYSKKLSVEIAEKVAAAKITEAKINE
TSENYRPAASRGALFYFLLSDLSKVHSFYKYSLESFIVVINRAIDAISEN
KIYGKTTMMSPRSLKKRVDELIESLTYTAYQTTRRGLFESHKLIVAAMLC
LRVLLRSEELNSDEVDHLIIGKVDVNPTPMPDALKSFLNDNIWAACKALE
TIHQFQGFCQSLETDVLQWKKWYSEEKAETADLPKAFKELSKFHRLLLLR
ALRPDRLPSALSQFVHDKMGERYIEQPPFNIFETFQETSKTVPIFFVLFP
GVDPTPDVERVAATFDVSANNGRFINISMGQGQEDRAKKALFDCAQKGHW
IMLQNVHLMQSWLYGLNGLEGFLESVFASPKTHPNFRVFISSEPPNVLLP
LMQIIPESILQGSLKIANEAPQYLKANLRRAYNKFDQEFLDKCDKKPTEF
KSCLFALCFFHSLMLGRKKFGTQGWSRVYNFNDGDLTICADVLYNYLSKY
DQVPWDDLRYIFGEIMYGGHITDDWDRRTNRTYLKVLIRSELLQQNFNLA
PQFKSPDPSKFDYEAYRKYIEEKLPIESPQMFGMHPNAEIGYLTQTCDQV
FNTILEVQGGSSGGGASKKDDGVMVTLTDFKTRCPHDFNMLLIEEKVKEK
TPYIVVCLQECERMNGLLKEIKTSLEDLRLGLTGALNMTDAMESLQQSLS
FNKVPDTWEKKAYFSKKPLSSWFADLIERNIQLQEWCKELVTPTSLCISY
LFNPMSYLTAIMQFTARAQGLPLDGITIQTNVTAMKGPEDVVNPAENGAY
IHGLFLEGAAWEIGGQGQDGYLIEQKPKELHPKMPVINAVAVPLDKKKKN
GQYDCPTYVTSARGQTFVFTANLNMESDDSDPNKWILSGTCMLMSDD
3D structure
PDB7k5b Structures of outer-arm dynein array on microtubule doublet reveal a motor coordination mechanism.
ChainC
Resolution4.5 Å
3D
structure
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Interaction with ligand
Gene Ontology
--> -->
 
 
UnboundLocalError
Python 3.6.8: /usr/bin/python3
Thu Nov 28 03:06:22 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '7k5b', asym_id = 'C', title = 'Structures of outer-arm dynein array on microtubule doublet reveal a motor coordination mechanism.'
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='7k5b', asym_id='C', title='Structures of outer-arm dynein array on microtubule doublet reveal a motor coordination mechanism.')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0005524,0007018,0008569,0016887,0030286,0045505,0051959', uniprot = '', pdbid = '7k5b', asym_id = 'C'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0005524,0007018,0008569,0016887,0030286,0045505,0051959', uniprot='', pdbid='7k5b', asym_id='C')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>