Structure of PDB 7eg0 Chain C

Receptor sequence
>7eg0C (length=372) Species: 9606 (Homo sapiens) [Search protein sequence]
KPILAPEPLVMDNLDSIMEQLNTWNFPIFDLVENIGRKCGRILSQVSYRL
FEDMGLFEAFKIPIREFMNYFHALEIGYRDIPYHNRIHATDVLHAVWYLT
TQPIPGLSTVGYVFSKTYNVTDDKYGCLSGNIPALELMALYVAAAMHDYD
HPGRTNAFLVATSAPQAVLYNDRSVLENHHAAAAWNLFMSRPEYNFLINL
DHVEFKHFRFLVIEAILATDLKKHFDFVAKFNGKVNDDVGIDWTNENDRL
LVCQMCIKLADINGPAKCKELHLQWTDGIVNEFYEQGDEEASLGLPISPF
MDRSAPQLANLQESFISHIVGPLCNSYDSAGLMPGKWVEKIYCQITQHLL
QNHKMWKKVIEEEQRLAGIENQ
3D structure
PDB7eg0 Structure of PDE3A-SLFN12 complex and structure-based design for a potent apoptosis inducer of tumor cells.
ChainC
Resolution3.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.1.4.17: 3',5'-cyclic-nucleotide phosphodiesterase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 J33 C Y751 G953 P954 H961 Q1001 F1004 Y83 G264 P265 H272 Q312 F315 BindingDB: IC50=50nM
BS02 MG C H756 H836 D837 D950 H88 H147 D148 D261
Gene Ontology
Molecular Function
GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity
GO:0008081 phosphoric diester hydrolase activity
Biological Process
GO:0007165 signal transduction

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:7eg0, PDBe:7eg0, PDBj:7eg0
PDBsum7eg0
PubMed34707099
UniProtQ14432|PDE3A_HUMAN cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A (Gene Name=PDE3A)

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