Structure of PDB 7dnf Chain C

Receptor sequence

>7dnfC (length=158) Species: 32630 (synthetic construct) [Search protein sequence]

GSDLGKKLLEAARAGQDDEVRILMANGADVNANDVYGITPLHLAAYMGHL
EIVEVLLKYGVDVNASDQFGNTPLHLAADDGHLEIVEVLLKHGTDVNATD
TWGSTPLHLAAHRGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNED
LAEILQKL

3D structure

PDB

7dnf Distinct conformations of the HIV-1 V3 loop crown are targetable for broad neutralization.

Chain

Resolution

1.78 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	C	E20 R23 Y46 I48 L53 Y56 M57	E10 R13 Y36 I38 L43 Y46 M47

External links

PDB	RCSB:7dnf, PDBe:7dnf, PDBj:7dnf
PDBsum	7dnf
PubMed	34795280

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