Structure of PDB 7byq Chain C

Receptor sequence
>7byqC (length=360) Species: 77133 (uncultured bacterium) [Search protein sequence]
AGGKVTSSTGIAPKRYVYYPGSEELGPDEIRVIACGTGMPTARRAQAAAA
WVVELGNGDKFIVDIGSGSMANIQSLMIPANYLTKIFLTHLHTDHWGDLV
SMWAGGWTAGRTDPLEVWGPSGSREDMGTKYAVEHMLKAYNWDYMTRAVT
INPRPGDINVHEFDYRALNEVVYQENGVTFRSWPCIHAGDGPVSFALEWN
GYKVVFGGDTAPNIWYPEYAKGADLAIHECWMTSDQMMTKYNQPAQLALR
INLDFHTSAQSFGQIMNMVQPRHAVAYAFFNDDDTRYDIYTGVRENYAGP
LSMATDMMVWNITRDAVTERMAVSPDHAWDVAASEYTQYILDGRLNVDEA
NAHWKQEFMG
3D structure
PDB7byq Structural Study of Metal Binding and Coordination in Ancient Metallo-beta-Lactamase PNGM-1 Variants.
ChainC
Resolution1.96 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.5.2.6: beta-lactamase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 ZN C H91 H93 H188 D210 H90 H92 H187 D209
Gene Ontology
Molecular Function
GO:0008800 beta-lactamase activity
GO:0016787 hydrolase activity
GO:0042781 3'-tRNA processing endoribonuclease activity
GO:0046872 metal ion binding
Biological Process
GO:0042780 tRNA 3'-end processing

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:7byq, PDBe:7byq, PDBj:7byq
PDBsum7byq
PubMed32664695
UniProtA0A2U8UYM6

[Back to BioLiP]