Structure of PDB 6zlz Chain C

Receptor sequence
>6zlzC (length=360) Species: 493803 (Merkel cell polyomavirus) [Search protein sequence]
CIPKPGCCPNVASVPKLLVKGGVEVLSVVTGEDSITQIELYLNPRMGVNS
PDLPTTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNEDITC
DTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFA
IGGEPLDLQGLVLDYQTQYPKTTNGGPITIETVLGRKMTPKNQGLDPQAK
AKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVL
LDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRW
VKNPYPVVNLINSLFSNLMPKVSGQPMEGKDNQVEEVRIYEGSEQLPGDP
DIVRFLDKFG
3D structure
PDB6zlz Structure of Merkel Cell Polyomavirus Capsid and Interaction with Its Glycosaminoglycan Attachment Receptor.
ChainC
Resolution3.52 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA C S236 E239 S219 E222
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
GO:0046872 metal ion binding
Cellular Component
GO:0019028 viral capsid
GO:0042025 host cell nucleus
GO:0044423 virion component

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:6zlz, PDBe:6zlz, PDBj:6zlz
PDBsum6zlz
PubMed32699083
UniProtB0G0W3

[Back to BioLiP]