Structure of PDB 6ygh Chain C

Receptor sequence
>6yghC (length=191) Species: 489543 (Hepatitis B virus duck/DHBV-16) [Search protein sequence]
DINASRALANVYDLPDDFFPKIDDLVRDAKDALEPYWKSDSIKKHVLIAT
HFVDLIEDFWQTTQGMHEIAESLRAVIPPTTTPVPPGYLIQHEEAEEIPL
GDLFKHQEERIVSFQPDYPITARIHAHLKAYAKINEESLDRARRLLWWHY
NCLLWGEAQVTNYISRLRTWLSTPEKYRGRDAPTIEAITRP
3D structure
PDB6ygh Slowly folding surface extension in the prototypic avian hepatitis B virus capsid governs stability.
ChainC
Resolution3.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide C W38 D41 W37 D40
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003723 RNA binding
GO:0005198 structural molecule activity
Biological Process
GO:0046718 symbiont entry into host cell
GO:0075521 microtubule-dependent intracellular transport of viral material towards nucleus
GO:0075732 viral penetration into host nucleus
Cellular Component
GO:0030430 host cell cytoplasm
GO:0039619 T=4 icosahedral viral capsid
GO:0043657 host cell

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6ygh, PDBe:6ygh, PDBj:6ygh
PDBsum6ygh
PubMed32795390
UniProtP0C6J7|CAPSD_DHBV1 Capsid protein (Gene Name=C)

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