Structure of PDB 6yc4 Chain C

Receptor sequence
>6yc4C (length=269) Species: 308116 (Dokdonia eikasta) [Search protein sequence]
QELGNANFENFIGATEGFSEIAYQFTSHILTLGYAVMLAGLLYFILTIKN
VDKKFQMSNILSAVVMVSAFLLLYAQAQNWTSSFTFNEEVGRYFLDPSGD
LFNNGYRYLNWLIDVPMLLFQILFVVSLTTSKFSSVRNQFWFSGAMMIIT
GYIGQFYEVSNLTAFLVWGAISSAFFFHILWVMKKVINEGKEGISPAGQK
ILSNIWILFLISWTLYPGAYLMPYLTGVDGFLYSEDGVMARQLVYTIADV
SSKVIYGVLLGNLAITLSK
3D structure
PDB6yc4 Molecular mechanism of light-driven sodium pumping.
ChainC
Resolution2.6 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 NA C Y25 T83 F86 T87 Y23 T81 F84 T85
BS02 RET C W113 M149 S174 W215 Y218 Y222 S254 K255 W111 M147 S172 W213 Y216 Y220 S252 K253
BS03 NA C V67 S70 A71 N112 I115 D116 V65 S68 A69 N110 I113 D114
Gene Ontology

View graph for
Cellular Component
External links
PDB RCSB:6yc4, PDBe:6yc4, PDBj:6yc4
PDBsum6yc4
PubMed32358514
UniProtN0DKS8

[Back to BioLiP]