Structure of PDB 6wvj Chain C

Receptor sequence
>6wvjC (length=1117) Species: 1423 (Bacillus subtilis) [Search protein sequence]
TGQLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGLREMFQD
ISPIEDFTGNLSLEFIDYSLGEPKYPVEESKERDVTYSAPLRVKVRLINK
ETGEVKDQDVFMGDFPIMTDTGTFIINGAERVIVSQLVRSPSVYFSGKVD
KNGKKGFTATVIPNRGAWLEYETDAKDVVYVRIDRTRKLPVTVLLRALGF
GSDQEILDLIGENEYLRNTLDKDNTENSDKALLEIYERLRPGEPPTVENA
KSLLDSRFFDPKRYDLANVGRYKINKKLHIKNRLFNQRLAETLVDPERRT
LDKVLPYLENGIGFRKLYPNGGVVEDEVTLQSIKIFAPTDQEGEQVINVI
GNAYIEEEIKNITPADIISSISYFFNLLHGVGDTDDIDHLGNRRLRSVGE
LLQNQFRIGLSRMERVVRERMSIQDTNTITPQQLINIRPVIASIKEFFGS
SQLSQFMDQTNPLAELTHKRRLSALGPGGLTRERAGMEVRDVHYSHYGRM
CPIETPEGPNIGLINSLSSYAKVNRFGFIETPYRRVDPETGKVTGRIDYL
TADEEDNYVVAQANARLDDEGAFIDDSIVARFRGENTVVSRNRVDYMDVS
PKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMQPEAPFVGTGMEY
VSGKDSGAAVICKHPGIVERVEAKNVWVRRYEEVDGQKVKGNLDKYSLLK
FVRSNQGTCYNQRPIVSVGDEVVKGEILADGPSMELGELALGRNVMVGFM
TWDGYNYEDAIIMSERLVKDDVYTSIHIEEYESEARDTKLGPEEITRDIP
NVGEDALRNLDDRGIIRIGAEVKDGDLLVGKVTPEVRDTSLRVPHGGGGI
IHDVKVFNREDGDELPPGVNQLVRVYIVQKRKISEGDKMAGRHGNKGVIS
KILPEEDMPYLPDGTPIDIMLNPLGVPSRMNIGQVLELHMGMAARYLGIH
IASPVFDGAREEDVWETLEEAGMSRDAKTVLYDGRTGEPFDNRVSVGIMY
MIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAY
GAAYTLQEILTVKSDDVVGRVKTYEAIVKGDNVPEPGVPESFKVLIKELQ
SLGMDVKILSGDEEEIE
3D structure
PDB6wvj Molecular basis for RNA polymerase-dependent transcription complex recycling by the helicase-like motor protein HelD.
ChainC
Resolution3.36 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.7.7.6: DNA-directed RNA polymerase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna C G1066 K1067 R1074 G1030 K1031 R1038
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003899 DNA-directed 5'-3' RNA polymerase activity
GO:0016779 nucleotidyltransferase activity
GO:0032549 ribonucleoside binding
GO:0034062 5'-3' RNA polymerase activity
Biological Process
GO:0006351 DNA-templated transcription
GO:0046677 response to antibiotic
Cellular Component
GO:0000428 DNA-directed RNA polymerase complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6wvj, PDBe:6wvj, PDBj:6wvj
PDBsum6wvj
PubMed33339820
UniProtP37870|RPOB_BACSU DNA-directed RNA polymerase subunit beta (Gene Name=rpoB)

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