Structure of PDB 6vom Chain C

Receptor sequence
>6vomC (length=500) Species: 3562 (Spinacia oleracea) [Search protein sequence]
RADEISKIIRERIEGYNREVKVVNTGTVLQVGDGIARIHGLDEVMAGELV
EFEEGTIGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAY
LGRVINALAKPIDGRGEITASESRLIESPAPGIMSRRSVYEPLQTGLIAI
DAMIPVGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGQKAS
SVAQVVTNFQERGAMEYTIVVAETADSPATLQYLAPYTGAALAEYFMYRE
RHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK
LSSLLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGI
RPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAELEAFAQFASDLD
KATQNQLARGQRLRELLKQPQSAPLTVEEQVMTIYTGTNGYLDSLELDQV
RKYLVELRTYVKTNKPEFQEIISSTKTFTEEAEALLKEAIQEQMERFLLQ
3D structure
PDB6vom Structural basis of redox modulation on chloroplast ATP synthase.
ChainC
Resolution3.6 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) K176 Q201 K202 R366
Catalytic site (residue number reindexed from 1) K172 Q197 K198 R362
Enzyme Commision number 7.1.2.2: H(+)-transporting two-sector ATPase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ATP C Q173 G175 K176 T177 A178 F350 R355 Q423 P424 Q425 Q169 G171 K172 T173 A174 F346 R351 Q419 P420 Q421
BS02 ADP C S365 R366 S361 R362
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0032559 adenyl ribonucleotide binding
GO:0043531 ADP binding
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
GO:0046961 proton-transporting ATPase activity, rotational mechanism
Biological Process
GO:0006754 ATP biosynthetic process
GO:0015986 proton motive force-driven ATP synthesis
GO:0046034 ATP metabolic process
GO:1902600 proton transmembrane transport
Cellular Component
GO:0009507 chloroplast
GO:0009535 chloroplast thylakoid membrane
GO:0009579 thylakoid
GO:0016020 membrane
GO:0043231 intracellular membrane-bounded organelle
GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6vom, PDBe:6vom, PDBj:6vom
PDBsum6vom
PubMed32879423
UniProtP06450|ATPA_SPIOL ATP synthase subunit alpha, chloroplastic (Gene Name=atpA)

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