Structure of PDB 6v1s Chain C

Receptor sequence
>6v1sC (length=265) Species: 1496 (Clostridioides difficile) [Search protein sequence]
DNIPDSYERNGYTIKDLIAVKWEDSFAEQGYKKYVSNYLESNTAGDPYTD
YEKASGSFDKAIKTEARDPLVAAYPIVGVGMEKLIISTNENKGESAYINA
NVRYYNTGTAPMYKVTPTTNLVLDGDTLSTIKAQENQIGNNLSPGDTYPK
KGLSPLALNTMDQFSSRLIPINYDQLKKLDAGKQIKLETTQVSGNFGTKN
SSGQIVTEGNSWSDYISQIDSISASIILDTENESYERRVTAKNLQDPEDK
TPELTIGEAIEKAFG
3D structure
PDB6v1s Structural elucidation of theClostridioides difficiletransferase toxin reveals a single-site binding mode for the enzyme.
ChainC
Resolution3.8 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA C D224 E231 N260 E263 D273 D1 E8 N37 E40 D50
Gene Ontology
Biological Process
GO:0051260 protein homooligomerization
Cellular Component
GO:0005576 extracellular region

View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:6v1s, PDBe:6v1s, PDBj:6v1s
PDBsum6v1s
PubMed32123082
UniProtA8DS70

[Back to BioLiP]