Structure of PDB 6ugm Chain C

Receptor sequence
>6ugmC (length=107) Species: 8355 (Xenopus laevis) [Search protein sequence]
AKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAE
ILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNI
QSVLLPK
3D structure
PDB6ugm Structural Basis of H2B Ubiquitination-Dependent H3K4 Methylation by COMPASS.
ChainC
Resolution3.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 dna C R29 R42 V43 A45 K75 T76 R77 R18 R31 V32 A34 K64 T65 R66
BS02 dna C A14 K15 T16 R17 R32 R42 R77 A3 K4 T5 R6 R21 R31 R66
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Cellular Component
GO:0000786 nucleosome

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Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:6ugm, PDBe:6ugm, PDBj:6ugm
PDBsum6ugm
PubMed31733991
UniProtQ6AZJ8

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