Structure of PDB 6r51 Chain C

Receptor sequence
>6r51C (length=196) Species: 1496 (Clostridioides difficile) [Search protein sequence]
HMDSTTIQQNKDTLSQIVVFPTGNYDKNEANAMVNRLANIDGKYLNALKQ
NNLKIKLLSGKLTDEKEYAYLKGVVPKGWEGTGKTWDDVPGLGGSTVALR
IGFSNKGKGHDAINLELHATAHAIDHIVLNDISKSAQFKQIFAKEGRSLG
NVNFLGVYPEEFFAESFAYYYLNQDTNSKLKSACPQTYSFLQNLAK
3D structure
PDB6r51 Molecular determinants of the mechanism and substrate specificity ofClostridium difficileproline-proline endopeptidase-1.
ChainC
Resolution1.94 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.4.24.89: Pro-Pro endopeptidase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide C L95 W103 W110 L116 G117 G118 S119 H134 D135 H142 H146 D149 H150 F178 L71 W79 W86 L92 G93 G94 S95 H110 D111 H118 H122 D125 H126 F154
Gene Ontology
Molecular Function
GO:0008237 metallopeptidase activity
GO:0046872 metal ion binding
Biological Process
GO:0006508 proteolysis
Cellular Component
GO:0005576 extracellular region

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6r51, PDBe:6r51, PDBj:6r51
PDBsum6r51
PubMed31182482
UniProtQ183R7|PPEP1_CLOD6 Pro-Pro endopeptidase (Gene Name=zmp1)

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