Structure of PDB 6prm Chain C

Receptor sequence

>6prmC (length=447) Species: 1872678 (Pseudoalteromonas fuliginea) [Search protein sequence]

SKPNIVLIFADDAGFGDFGFQGSTQLKTPNLDKLAQSGVRFTQGYVSDST
CGPSRAGLMTGKYQQRFGYEEINVPGFMSGNSALKGADMGLPLDQKTMGD
YLKEQGYKTAVFGKWHLGDADRFHPLKRGFDTFLGFRGGDRSYFNYSEQE
MKNGNKHFFDKKLERDFGNYEEPKEYLTDVLGKEAAKYIEQNKDEPFFIY
LAFNAVHTPLESDPKDLAKFPNLTGKRKELAAMTLGLDRASGYVLDKLKE
LGLDDNTIVVFSNDNGGPSDKNASNNAPLAGTKSNQLEGGIRVPFLISWP
KHIKPGSTYDYPVSTLDLLPTFYSAAKGKALGSDIDGVDLLPYIQGENTA
RPHKVMYWKKENRAVIRDNDWKLIRYPDRPAELYDLSSDISEQTDLAAKN
PERVKTMFKSLFEWELTLERPRWLLKRKYEKYDIDRMDKYRLPATQP

3D structure

PDB

6prm Insights into the kappa / iota-carrageenan metabolism pathway of some marinePseudoalteromonasspecies.

Chain

Resolution

2.5 Å

3D
structure

Catalytic site residues are labeled in the structure
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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	CA	C	D37 D38 C77 D290 N291	D11 D12 C51 D264 N265

External links

PDB	RCSB:6prm, PDBe:6prm, PDBj:6prm
PDBsum	6prm
PubMed	31886414

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