Structure of PDB 6oo2 Chain C

Receptor sequence
>6oo2C (length=321) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
NKKLRGALSSAILSEKPNVKWEDVAGLEGAKEALKEAVILPVKFPHLFKG
NRKPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESE
KLVKQLFAMARENKPSIIFIDEVDALTGTRGEGESEASRRIKTELLVQMN
GVGNDSQGVLVLGATNIPWQLDSAIRRRFERRIYIPLPDLAARTTMFEIN
VGDTPCVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFK
DVSTRKLTPCSPGDDGAIEMSWTDIEADELKEPDLTIKDFLKAIKSTRPT
VNEDDLLKQEQFTRDFGQEGN
3D structure
PDB6oo2 Structure of Vps4 with circular peptides and implications for translocation of two polypeptide chains by AAA+ ATPases.
ChainC
Resolution4.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 peptide C K205 W206 E247 K94 W95 E136
BS02 ADP C V135 A136 G176 T177 K179 S180 Y181 M307 G336 V24 A25 G65 T66 K68 S69 Y70 M196 G225
BS03 BEF C P175 G176 K179 P64 G65 K68
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0016887 ATP hydrolysis activity

View graph for
Molecular Function
External links
PDB RCSB:6oo2, PDBe:6oo2, PDBj:6oo2
PDBsum6oo2
PubMed31184588
UniProtP52917|VPS4_YEAST Vacuolar protein sorting-associated protein 4 (Gene Name=VPS4)

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