Structure of PDB 6mss Chain C

Receptor sequence
>6mssC (length=270) Species: 10090 (Mus musculus) [Search protein sequence]
NYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQG
KLSNQQWEKLQHMFQVYRVSFTRDIQELVKMMSPKEDYPIEIQLSAGCEM
YPGNASESFLHVAFQGKYVVRFWGTSWQTVPGAPSWLDLPIKVLNADQGT
SATVQMLLNDTCPLFVRGLLEAGKSDLEKQEKPVAWLSSVPGHRQLVCHV
SGFYPKPVWVMWMRGDQEQQGTHRGDFLPNADETWYLQATLDVEAGEEAG
LACRVKHSSLGGQDIILYWG
3D structure
PDB6mss Distinct CD1d docking strategies exhibited by diverse Type II NKT cell receptors.
ChainC
Resolution3.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 SRV C M69 Y73 S76 F77 D80 M88 A102 V118 F120 W133 W142 L150 T156 T159 V160 F171 M63 Y67 S70 F71 D74 M82 A96 V112 F114 W127 W136 L144 T150 T153 V154 F165
External links
PDB RCSB:6mss, PDBe:6mss, PDBj:6mss
PDBsum6mss
PubMed31748533
UniProtP11609|CD1D1_MOUSE Antigen-presenting glycoprotein CD1d1 (Gene Name=Cd1d1)

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