Structure of PDB 6mat Chain C

Receptor sequence
>6matC (length=578) Species: 759272 (Thermochaetoides thermophila DSM 1495) [Search protein sequence]
RTPPTKVSILDIAGVDDTLQRLLKEVWFPLRGGEACEKMGYRYDNGVLLH
GPSGCGKTTLAHAIAGSIGVAFIPVSAPSVIGGTSGESEKNIRDVFDEAI
RLAPCLIFLDQIDAIAGRRESANKGMESRIVAEIMNGMDRIRQNTPLGKN
VVVLAATNRPEFLDPAIRRRFSVEIDMGMPSERAREQILRSLTRDLSLAD
DINFKELAKMTPGYVGSDLQYVVKAAVSESFQANIDSLLAQARAKHPADH
LANVSQPQRDWLLLEAHRDEEVSWPSTKITMEQFRKAVSLVQPASKREGF
STIPDTTWSHVGALEDVRKKLEMSIIGPIKNPELFTRVGIKPAAGILLWG
PPGCGKTLVAKAVANESKANFISIKGPELLNKYVGESERAVRQLFSRAKS
SAPCILFFDQMDALVPRRDDSLSDASARVVNTLLTELDGVGDRSGIYVIG
ATNRPDMIDEAIRRPGRLGTSIYVGLPSAEDRVKILKTLYRNTVQGTTDA
DLEKVALDLRCTGFSGADLGNLMQAAAQACLERVYTQRQQKRKEGEEEIE
PVITMEDWEKALNEVKPSVKDPEKYMHS
3D structure
PDB6mat Cryo-EM structure of the essential ribosome assembly AAA-ATPase Rix7.
ChainC
Resolution4.5 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide C T276 K574 T84 K382
BS02 ATP C D630 R656 R659 D438 R464 R467
BS03 ATP C H502 G545 C546 G547 K548 T549 L550 N645 H310 G353 C354 G355 K356 T357 L358 N453
BS04 ATP C S245 G246 C247 G248 K249 T250 T251 Q412 S53 G54 C55 G56 K57 T58 T59 Q220
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0005524 ATP binding
GO:0016887 ATP hydrolysis activity
GO:1990275 preribosome binding
Biological Process
GO:0042254 ribosome biogenesis
Cellular Component
GO:0005634 nucleus

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6mat, PDBe:6mat, PDBj:6mat
PDBsum6mat
PubMed30705282
UniProtG0RZG1

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