Structure of PDB 6klo Chain C

Receptor sequence
>6kloC (length=368) Species: 1502 (Clostridium perfringens) [Search protein sequence]
EDLDTDNDNIPDAYEKNGYTIKDSIAVKWNDSFAEQGYKKYVSSYLESNT
AGDPYTDYQKASGSIDKAIKLEARDPLVAAYPVVGVGMENLIISTNEHAS
SDQGKTVSRATTVQDSNGESWNTGLSINKGESAYINANVRYYNTGTAPMY
KVTPTTNLVLDGETLATIKAQDNQIGNNLSPNETYPKKGLSPLALNTMDQ
FNARLIPINYDQLKKLDSGKQIKLETTQVSGNYGTKNSQGQIITEGNSWS
NYISQIDSVSASIILDTGSQTFERRVAAKEQGNPEDKTPEITIGEAIKKA
FSATKNGELLYFNGIPIDESCVELIFDDNTSEIIKEQLKYLDDKKIYNVK
LERGMNILIKVPSYFTNF
3D structure
PDB6klo Cryo-EM structures reveal translocational unfolding in the clostridial binary iota toxin complex.
ChainC
Resolution2.8 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA C D221 D223 E230 S259 E262 D272 D6 D8 E15 S44 E47 D57
BS02 CA C D219 D221 D223 I225 E230 D4 D6 D8 I10 E15
Gene Ontology
Biological Process
GO:0051260 protein homooligomerization
Cellular Component
GO:0005576 extracellular region

View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:6klo, PDBe:6klo, PDBj:6klo
PDBsum6klo
PubMed32123390
UniProtQ46221

[Back to BioLiP]