Structure of PDB 6jlp Chain C

Receptor sequence
>6jlpC (length=451) Species: 32053 (Thermostichus vulcanus) [Search protein sequence]
ATNRDQESSGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMTLFEL
AHFIPEKPMYEQGLILIPHIATLGWGVGPGGEVVDTFPFFVVGVVHLISS
AVLGFGGVYHAIRGPETLEEYSSFFGYDWKDKNKMTTILGFHLIVLGIGA
LLLVAKAMFFGGLYDTWAPGGGDVRVITNPTLDPRVIFGYLLKSPFGGEG
WIVSVNNLEDVVGGHIWIGLICIAGGIWHILTTPFGWARRAFIWSGEAYL
SYSLGALSMMGFIATCFVWFNNTVYPSEFYGPTGPEASQAQAMTFLIRDQ
KLGANVGSAQGPTGLGKYLMRSPTGEIIFGGETMRFWDFRGPWLEPLRGP
NGLDLNKIKNDIQPWQERRAAEYMTHAPLGSLNSVGGVATEINSVNFVSP
RSWLATSHFVLAFFFLVGHLWHAGRARAAAAGFEKGIDRESEPVLSMPSL
D
3D structure
PDB6jlp An oxyl/oxo mechanism for oxygen-oxygen coupling in PSII revealed by an x-ray free-electron laser.
ChainC
Resolution2.5 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 OEX C E354 R357 E332 R335
BS02 OEY C E354 R357 E332 R335
BS03 CLA C T94 G171 A172 L175 H237 M282 I285 F289 V296 Y297 T72 G149 A150 L153 H215 M260 I263 F267 V274 Y275
BS04 CLA C W63 H91 L279 M282 A286 Y297 H430 L433 F437 W41 H69 L257 M260 A264 Y275 H408 L411 F415
BS05 CLA C V61 L88 H91 V114 H118 V39 L66 H69 V92 H96
BS06 CLA C W63 M67 F70 G85 I87 W425 L426 S429 F436 W41 M45 F48 G63 I65 W403 L404 S407 F414
BS07 CLA C F264 Y274 G277 H441 L442 A445 R449 F242 Y252 G255 H419 L420 A423 R427
BS08 CLA C L161 L165 I243 G247 W250 H251 T255 F257 F264 L139 L143 I221 G225 W228 H229 T233 F235 F242
BS09 CLA C M157 L161 H164 L165 L168 F264 W266 Y271 Y274 S275 M282 M135 L139 H142 L143 L146 F242 W244 Y249 Y252 S253 M260
BS10 CLA C W36 A37 G38 N39 A40 L272 L276 F436 F437 G440 W443 H444 R447 W14 A15 G16 N17 A18 L250 L254 F414 F415 G418 W421 H422 R425
BS11 CLA C N39 L49 A52 H53 H56 W151 I160 H164 G268 E269 Y271 L272 S275 L276 L279 N17 L27 A30 H31 H34 W129 I138 H142 G246 E247 Y249 L250 S253 L254 L257
BS12 CLA C H56 L59 I60 W63 F437 H34 L37 I38 W41 F415
BS13 CLA C R26 W35 G38 N39 R41 L42 K48 A52 F127 I134 R4 W13 G16 N17 R19 L20 K26 A30 F105 I112
BS14 CLA C H53 F147 F163 H164 I166 V167 I170 H31 F125 F141 H142 I144 V145 I148
BS15 CLA C L50 V54 V124 G128 Y131 H132 P137 Y143 F147 L28 V32 V102 G106 Y109 H110 P115 Y121 F125
BS16 CA C N155 T158 T159 H251 I252 T254 N133 T136 T137 H229 I230 T232
Gene Ontology
Molecular Function
GO:0016168 chlorophyll binding
GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
GO:0046872 metal ion binding
Biological Process
GO:0009767 photosynthetic electron transport chain
GO:0009772 photosynthetic electron transport in photosystem II
GO:0015979 photosynthesis
GO:0019684 photosynthesis, light reaction
Cellular Component
GO:0005737 cytoplasm
GO:0009521 photosystem
GO:0009523 photosystem II
GO:0009579 thylakoid
GO:0016020 membrane
GO:0031676 plasma membrane-derived thylakoid membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6jlp, PDBe:6jlp, PDBj:6jlp
PDBsum6jlp
PubMed31624207
UniProtD0VWR7|PSBC_THEVL Photosystem II CP43 reaction center protein (Fragment) (Gene Name=psbC)

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