Structure of PDB 6jll Chain C

Receptor sequence
>6jllC (length=451) Species: 32053 (Thermostichus vulcanus) [Search protein sequence]
ATNRDQESSGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMTLFEL
AHFIPEKPMYEQGLILIPHIATLGWGVGPGGEVVDTFPFFVVGVVHLISS
AVLGFGGVYHAIRGPETLEEYSSFFGYDWKDKNKMTTILGFHLIVLGIGA
LLLVAKAMFFGGLYDTWAPGGGDVRVITNPTLDPRVIFGYLLKSPFGGEG
WIVSVNNLEDVVGGHIWIGLICIAGGIWHILTTPFGWARRAFIWSGEAYL
SYSLGALSMMGFIATCFVWFNNTVYPSEFYGPTGPEASQAQAMTFLIRDQ
KLGANVGSAQGPTGLGKYLMRSPTGEIIFGGETMRFWDFRGPWLEPLRGP
NGLDLNKIKNDIQPWQERRAAEYMTHAPLGSLNSVGGVATEINSVNFVSP
RSWLATSHFVLAFFFLVGHLWHAGRARAAAAGFEKGIDRESEPVLSMPSL
D
3D structure
PDB6jll An oxyl/oxo mechanism for oxygen-oxygen coupling in PSII revealed by an x-ray free-electron laser.
ChainC
Resolution2.15 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 OEX C E354 R357 E332 R335
BS02 OEY C E354 R357 E332 R335
BS03 CLA C G171 A172 L175 H237 M282 F289 V296 Y297 G149 A150 L153 H215 M260 F267 V274 Y275
BS04 CLA C W63 H91 L95 L279 M282 A286 V290 Y297 H430 L433 F437 W41 H69 L73 L257 M260 A264 V268 Y275 H408 L411 F415
BS05 CLA C I60 V61 L88 H91 V114 H118 I38 V39 L66 H69 V92 H96
BS06 CLA C W63 M67 F70 G85 I87 W425 S429 F436 W41 M45 F48 G63 I65 W403 S407 F414
BS07 CLA C F264 Y274 G277 L438 H441 L442 A445 R449 F242 Y252 G255 L416 H419 L420 A423 R427
BS08 CLA C L161 L165 I243 G247 W250 H251 T255 P256 F257 W259 F264 L139 L143 I221 G225 W228 H229 T233 P234 F235 W237 F242
BS09 CLA C M157 L161 H164 L165 L168 C244 F264 W266 Y271 Y274 S275 A278 M282 M135 L139 H142 L143 L146 C222 F242 W244 Y249 Y252 S253 A256 M260
BS10 CLA C W36 A37 G38 N39 L272 L276 F436 F437 G440 W443 H444 R447 W14 A15 G16 N17 L250 L254 F414 F415 G418 W421 H422 R425
BS11 CLA C N39 L49 A52 H53 H56 W151 H164 E269 Y271 L272 S275 N17 L27 A30 H31 H34 W129 H142 E247 Y249 L250 S253
BS12 CLA C H56 L59 W63 F437 H34 L37 W41 F415
BS13 CLA C R26 W35 G38 N39 R41 L42 A52 F127 R4 W13 G16 N17 R19 L20 A30 F105
BS14 CLA C H53 A57 F146 F147 F163 H164 I166 V167 I170 H31 A35 F124 F125 F141 H142 I144 V145 I148
BS15 CLA C L50 G128 Y131 H132 P137 Y143 F147 L28 G106 Y109 H110 P115 Y121 F125
BS16 CA C N155 T158 T159 H251 I252 T254 N133 T136 T137 H229 I230 T232
Gene Ontology
Molecular Function
GO:0016168 chlorophyll binding
GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
GO:0046872 metal ion binding
Biological Process
GO:0009767 photosynthetic electron transport chain
GO:0009772 photosynthetic electron transport in photosystem II
GO:0015979 photosynthesis
GO:0019684 photosynthesis, light reaction
Cellular Component
GO:0005737 cytoplasm
GO:0009521 photosystem
GO:0009523 photosystem II
GO:0009579 thylakoid
GO:0016020 membrane
GO:0031676 plasma membrane-derived thylakoid membrane

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:6jll, PDBe:6jll, PDBj:6jll
PDBsum6jll
PubMed31624207
UniProtD0VWR7|PSBC_THEVL Photosystem II CP43 reaction center protein (Fragment) (Gene Name=psbC)

[Back to BioLiP]