Structure of PDB 6jf6 Chain C

Receptor sequence
>6jf6C (length=159) Species: 470 (Acinetobacter baumannii) [Search protein sequence]
MSVVLPVAKRGEDILKLIAAPVSANELNSNWLYQLADAMHATMLERNGVG
IAAPQVYISKRVIIVASRPNPRYPDAPEMNAVVMVNPEILEFSSEMCLGE
EGCLSVPDERGQVERAEMVKVKYLTLQGEMVETVFQGFPARIVQHEVDHL
NGILFVERI
3D structure
PDB6jf6 Met-ala-ser bound crystal structure of class I type b peptide deformylase from Acinetobacter baumannii
ChainC
Resolution2.35 Å
3D
structure
Catalytic site residues are labeled in the structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide C N47 G48 V49 G50 N70 R72 E101 G102 R110 H145 N47 G48 V49 G50 N70 R72 E101 G102 R110 H145
BS02 ZN C C103 H145 H149 C103 H145 H149
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Fri Nov 29 23:46:23 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '6jf6', asym_id = 'C', title = 'Met-ala-ser bound crystal structure of class I t... peptide deformylase from Acinetobacter baumannii'
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='6jf6', asym_id='C', title='Met-ala-ser bound crystal structure of class I t... peptide deformylase from Acinetobacter baumannii')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0042586', uniprot = '', pdbid = '6jf6', asym_id = 'C'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0042586', uniprot='', pdbid='6jf6', asym_id='C')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>