Structure of PDB 6f5d Chain C

Receptor sequence
>6f5dC (length=521) Species: 5702 (Trypanosoma brucei brucei) [Search protein sequence]
FKTTEMIGYVHSIDGTIATLIPAPGNPGVAYNTIIQIQVSPTTFAAGLVF
NLEKDGRIGIILMDNITEVQSGQKVMATGQLLHIPVGAGVLGKVVNPLGH
EVPVSTLGKVDTGAPNIVSRSPVNYNLLTGFKAVDTMIPIGRGQRELIVG
DRQTGKTSIAVSTIINQVRINQQILSKNAVISIYVSIGQRCSNVARIHRL
LQSYGALRYTTVMAATAAEPAGLQYLAPYAGVTMGEYFMNRGRHCLCVYD
DLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAMLSPGKGGG
SVTALPIVETLSNDVTAYIVTNVISITDGQIYLDTKLFTGGQRPAVNIGL
SVSRVGSSAQNAAMKGVAGKLKGILAEYRKLAADQTIPMIRGARFVALFN
QKQPSYFMNAIVSLYACLNGYLDDVKVQYVKFYEYLLVHRDLGIMYGTAK
NKFFYMYVQELNYLIRFFTLNSPILHGELEEMLKQHTHLFLQHYQSKMNA
IKSEKDVKALKNLLYSCKRAV
3D structure
PDB6f5d ATP synthase fromTrypanosoma bruceihas an elaborated canonical F1-domain and conventional catalytic sites.
ChainC
Resolution3.2 Å
3D
structure
Catalytic site residues are labeled in the structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Catalytic site (original residue number in PDB) K188 Q221 R222 R386
Catalytic site (residue number reindexed from 1) K156 Q189 R190 R354
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ADP C Q185 G187 K188 T189 S190 R375 Q153 G155 K156 T157 S158 R343
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0032559 adenyl ribonucleotide binding
GO:0043531 ADP binding
GO:0046872 metal ion binding
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
Biological Process
GO:0006754 ATP biosynthetic process
GO:0015986 proton motive force-driven ATP synthesis
GO:1902600 proton transmembrane transport
Cellular Component
GO:0005739 mitochondrion
GO:0005743 mitochondrial inner membrane
GO:0016020 membrane
GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:6f5d, PDBe:6f5d, PDBj:6f5d
PDBsum6f5d
PubMed29440423
UniProtQ57TX9

[Back to BioLiP]