Structure of PDB 6dju Chain C

Receptor sequence
>6djuC (length=614) Species: 1773 (Mycobacterium tuberculosis) [Search protein sequence]
QALQKYSTDLTARAREGKLDPVIGRDNEIRRVVQVLSRRTKNNPVLIGEP
GVGKTAIVEGLAQRIVAGDVPESLRDKTIVALDLGSMVAGSKYRGEFEER
LKAVLDDIKNSAGQIITFIDELHTIVGAGATAMDAGNMIKPMLARGELRL
VGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEVH
HGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPV
EIDEVERLVRRLEIEEMALSLAKLRSELADQKEKLAELTTRWQNEKNAKE
EVGPDDIADVVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTA
VSDAVRRSRAGVSDPNRPTGAFMFLGPTGVGKTELAKALADFLFDDERAM
VRIDMSEYGEKHTVARLIGAPPGYVGYEAGGQLTEAVRRRPYTVVLFDEI
EKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTSNLGSGGSAEQV
LAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRRL
QLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDG
DTVPVNVSPDADSL
3D structure
PDB6dju ATP hydrolysis-coupled peptide translocation mechanism ofMycobacterium tuberculosisClpB.
ChainC
Resolution3.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide C K250 Y655 V656 K92 Y424 V425
BS02 AGS C R332 R333 R171 R172
BS03 AGS C R571 T609 V611 G612 K613 T614 E615 N721 R805 R340 T378 V380 G381 K382 T383 E384 N490 R574
BS04 AGS C I181 G209 G211 T213 I23 G51 G53 T55
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0016887 ATP hydrolysis activity
Biological Process
GO:0009408 response to heat
GO:0034605 cellular response to heat
GO:0042026 protein refolding
Cellular Component
GO:0005737 cytoplasm
GO:0005886 plasma membrane
GO:0009274 peptidoglycan-based cell wall

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6dju, PDBe:6dju, PDBj:6dju
PDBsum6dju
PubMed30257943
UniProtP9WPD1|CLPB_MYCTU Chaperone protein ClpB (Gene Name=clpB)

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