Structure of PDB 6d11 Chain C

Receptor sequence

>6d11C (length=221) Species: 9606 (Homo sapiens) [Search protein sequence]

QVQLLESGGGMVQPGGSLRLSCTASGFSFSNYGMSWVRQAPGKGPEWVSG
ISGSSGDTYYADSVKGRFTISRDNSKNTVNLQMNSLRAEDTAVYYCAKEG
GFCSSATCYYYFDCWGQGTLVTVSSASTKGPSVFPLAPSSGTAALGCLVK
DYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQT
YICNVNHKPSNTKVDKRVEPK

3D structure

PDB

6d11 Antihomotypic affinity maturation improves human B cell responses against a repetitive epitope.

Chain

Resolution

3.4 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	C	D56 T57 Y58 G96 F98 S100 S100A C100D Y100E	D57 T58 Y59 G100 F102 S104 S105 C108 Y109

External links

PDB	RCSB:6d11, PDBe:6d11, PDBj:6d11
PDBsum	6d11
PubMed	29880723

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