Structure of PDB 6d01 Chain C

Receptor sequence

>6d01C (length=220) Species: 9606 (Homo sapiens) [Search protein sequence]

QVQLVESGGGVVQPGRSLRLSCAASGFTFSNYGMHWVRQAPGKGLEWVAV
IWYDGSKKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARVR
DSSDYYGDAFDIWGQGTMVTVSSASTKGPSVFPLAPSSGTAALGCLVKDY
FPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYI
CNVNHKPSNTKVDKRVEPKS

3D structure

PDB

6d01 Antihomotypic affinity maturation improves human B cell responses against a repetitive epitope.

Chain

Resolution

3.2 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	C	N31 Y32 W52 Y52A Y58 D97 S98 S99 D100 Y100A Y100B G100C	N31 Y32 W52 Y53 Y59 D101 S102 S103 D104 Y105 Y106 G107

External links

PDB	RCSB:6d01, PDBe:6d01, PDBj:6d01
PDBsum	6d01
PubMed	29880723

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