Structure of PDB 6bnl Chain C

Receptor sequence

>6bnlC (length=202) Species: 9606 (Homo sapiens) [Search protein sequence]

TQVEQSPQSLVVRQGENSVLQCNYSVTPDNHLRWFKQDTGKGLVSLTVLV
DQKDKTSNGRYSATLDKDAKHSTLHITATLLDDTATYICVVGDRGSALGR
LHFGAGTQLIVIPDIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQS
KDSDVYITDKCVLDMRSMDFKSNSAVAWSNKSDFACANAFNNSIIPEDTF
FP

3D structure

PDB

6bnl Dual Modifications of alpha-Galactosylceramide Synergize to Promote Activation of Human Invariant Natural Killer T Cells and Stimulate Anti-tumor Immunity.

Chain

Resolution

2.6 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	QWV	C	P28 R95	P28 R94	PDBbind-CN: -logKd/Ki=6.96,Kd=110nM

External links

PDB	RCSB:6bnl, PDBe:6bnl, PDBj:6bnl
PDBsum	6bnl
PubMed	29576533

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