Structure of PDB 6bnk Chain C

Receptor sequence

>6bnkC (length=203) Species: 9606 (Homo sapiens) [Search protein sequence]

TQVEQSPQSLVVRQGENSVLQCNYSVTPDNHLRWFKQDTGKGLVSLTVLV
DQKDKTSNGRYSATLDKDAKHSTLHITATLLDDTATYICVVGDRGSALGR
LHFGAGTQLIVIPDIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQS
KDSDVYITDKCVLDMRSMDFKSNSAVAWSNKSDFACANAFNNSIIPEDTF
FPS

3D structure

PDB

6bnk Dual Modifications of alpha-Galactosylceramide Synergize to Promote Activation of Human Invariant Natural Killer T Cells and Stimulate Anti-tumor Immunity.

Chain

Resolution

3.2 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	AGH	C	P28 R95	P28 R94	PDBbind-CN: -logKd/Ki=6.99,Kd=102nM

External links

PDB	RCSB:6bnk, PDBe:6bnk, PDBj:6bnk
PDBsum	6bnk
PubMed	29576533

[Back to BioLiP]