Structure of PDB 6b0j Chain C

Receptor sequence

>6b0jC (length=451) Species: 53246 (Pseudoalteromonas) [Search protein sequence]

QKPNIILIVADDLGYADVGFNGSKDIITPNIDDLAKSGTSFSDAYVAHPF
SGPSRAALMTGRYPHKIGSQFNLPTRGSNVGVPTDAKFISKLLNENNYFT
GALGKWHMGDTPQHHPNKRGFDEYYGFLGGGHNYFPDQYQPQYKKQKAQG
LKNIFEYITPLEHNGKEVKETQYITDALSREAVNFVDKAVNKKHPFFLYL
AYNAPHTPLQAKDEDMAMFPNIKNKDRKTYAGMVYAVDRGVGKLVEALKK
NNQYDNTLIVFMSDNGGKLSKGANNFPLKAGKGSTQEGGFRVPMLFHWPK
HVPAGKRFSHPVSALDLYPTFAALAGAKVEENQHLDGTNMWPAFIKNENP
HKDEPIYALRHRKGYSDAAIRMNQWKALKVNQQPWQLFNIENDISEKHDV
SKSNKALLTDMVREMEKWSWDNQQPSWFHETTEGVNWRLDAMPRFDKTFK
T

3D structure

PDB

6b0j The Molecular Basis of Polysaccharide Sulfatase Activity and a Nomenclature for Catalytic Subsites in this Class of Enzyme.

Chain

Resolution

2.5 Å

3D
structure

Catalytic site residues are labeled in the structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	G4S	C	S78 H134 G157 Y184 H233 K309	S51 H107 G130 Y157 H206 K282
BS02	DGS	C	F77 K309 G310 R387 H456	F50 K282 G283 R360 H429
BS03	G4S	C	R387 K390 H456	R360 K363 H429
BS04	CA	C	D38 D39 D291 N292	D11 D12 D264 N265
BS05	9RN	C	Y184 T234	Y157 T207
BS06	ARG	C	N376 E418	N349 E391

External links

PDB	RCSB:6b0j, PDBe:6b0j, PDBj:6b0j
PDBsum	6b0j
PubMed	29681469

[Back to BioLiP]