Structure of PDB 5yej Chain C

Receptor sequence
>5yejC (length=169) Species: 246196 (Mycolicibacterium smegmatis MC2 155) [Search protein sequence]
QLHKPDVVAAATKILDDHGIADLTMRRLARELDVTPGALYWHFANKQELL
GAVADHILRTARTDTADLAWREQIHESCRALRDALLSHTDGAELVSASFA
SGQSVVITEIVEQLGRAARAAGVSDADVDAAARTVIYYVLGFTVDEQSRL
QWRQFRFGLQLLVDGLAAH
3D structure
PDB5yej Structural insights into operator recognition by BioQ in the Mycobacterium smegmatis biotin synthesis pathway.
ChainC
Resolution2.698 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna C Q2 L3 V35 T36 W42 Q1 L2 V34 T35 W41 PDBbind-CN: Kd=13.8nM
BS02 dna C T25 M26 R27 Y41 N46 K47 T24 M25 R26 Y40 N45 K46 PDBbind-CN: Kd=13.8nM
Gene Ontology
Molecular Function
GO:0000976 transcription cis-regulatory region binding
GO:0003677 DNA binding
GO:0003700 DNA-binding transcription factor activity
GO:0046872 metal ion binding
Biological Process
GO:0006355 regulation of DNA-templated transcription
GO:0045892 negative regulation of DNA-templated transcription
GO:0046677 response to antibiotic

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Molecular Function
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Biological Process
External links
PDB RCSB:5yej, PDBe:5yej, PDBj:5yej
PDBsum5yej
PubMed29852200
UniProtA0QX69

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