Structure of PDB 5yd0 Chain C

Receptor sequence
>5yd0C (length=316) Species: 10116 (Rattus norvegicus) [Search protein sequence]
SGLEVLFQGPHMGSPDLIIHAGEVTLGEKDRNKMDSKKKRLEKARITEAA
CALLNSGGGVIVMQMSNKSEHPVEMGLDLETSLRELIPSSDLQAFIETKQ
QGDLFYIFVKSWSSTKPRICSLSSSLYCRSLTSKLPLDSKETFEFLERKK
TCVKGDLESNPAFEIFQSERLEYGQRLPFSESASIEFKQFSTRRAHEYIK
SVIPEYISAFANTQGGYLLFGVDSKRVLGCPKDNVDRDSLKAVVNEAISK
LPVFHFCSSKEKVSYKTRVIDVYLCVIKVERFCCAVFSEAPISWMADKEN
GVYSLNTEKWVRMMVD
3D structure
PDB5yd0 Structure of Schlafen13 reveals a new class of tRNA/rRNA- targeting RNase engaged in translational control
ChainC
Resolution3.182 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.1.-.-
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 ZN C H281 C317 C318 H255 C283 C284
External links
PDB RCSB:5yd0, PDBe:5yd0, PDBj:5yd0
PDBsum5yd0
PubMed29563550
UniProtQ5U311|SLN13_RAT Schlafen family member 13 (Gene Name=Slfn13)

[Back to BioLiP]