Structure of PDB 5xqj Chain C

Receptor sequence
>5xqjC (length=885) Species: 5076 (Penicillium chrysogenum) [Search protein sequence]
FNCTSSSATVHWLGDKPTYHAGVTFGLPWPQGKYRPQETSFSLTSELQSW
ATGYWADGSLKWTAHAIAESNQIYDQYTVTASSLGCVSSIVVTDNSDALT
VNTGEVAVSFPKGGNVIIGDIKTKSGKVIGANGRLVLQSQDSVPDNFDNR
ANSPIQYSNFDGNINEVFVNQTSARTLVTVRGNHTVTDGTDHDPWLPFVV
RFYLYANSATIKVMHSIVFDGDENDFITGLGIRFDVPLKGEEYYDRHIRF
AGVDGGIFNEAVQGITGLRRDPGEEIRAAQFAGQKLADTETWEPRVSTRL
KWIPTWADYGLTQLTADGFGLKKRTKAGQSWVNIPSGTRAEGLAYLGGAT
QGGLAVGLRDFWKRYPVGLDISNAASDTGELTLWLYSPAAEPLDLRPFHD
GLGQDGYEDQLDALEITYEDWEPGFDTPYGIARTSEVYLFAFDQTPTSDK
LASLTAYMNDPPVLVAEPKYIHETQALGEYWALPGSSPAAATLEDRLQFI
FDFYKGQIEQRRWYGFLDYGDFMHTYDPDRHTWRYDVGGYAWDNSELSPD
LFFWLYFLRTGSKDAYRFAEALTRHTGEVDVYHIGDWKGLGTRHGVQHWS
DSAKQARISQPQYRKYFFYLSGGDERVGELLEELLDTDKTYGELDPQRKV
RTDGWEPSPNSTVSFGLGTDWSGLAAGWLIEWERRGPRWEEAKTKLTNTI
AGIANLTNGFVTGSGLYDPVTWTLGPPPSDPGNRGNVSISHLNAVFGLPE
VVSEAIAYLADDIPKGFKQAWLDYCYYYHASASEQKDRYGVSFKISLLQA
HSRLAAYAAYETKNKTLALRAWKDFYASDGLLPDAPWNITHVDGSDVLVP
VDEAAWLATNDIAQYGLAVIQNLAYVSDSLDDYQS
3D structure
PDB5xqj Crystal structure of exo-rhamnogalacturonan lyase from Penicillium chrysogenum as a member of polysaccharide lyase family 26
ChainC
Resolution2.75 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 RAM C D460 R648 D420 R607
BS02 GAD C Y458 E587 R634 H635 L783 Y418 E546 R593 H594 L742
BS03 GAL C Q646 R648 Q688 T710 Q605 R607 Q647 T669
BS04 CA C D562 N585 H616 D621 H639 D521 N544 H575 D580 H598
Gene Ontology
Molecular Function
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:5xqj, PDBe:5xqj, PDBj:5xqj
PDBsum5xqj
PubMed29574769
UniProtB6H7Q7

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