Structure of PDB 5xm3 Chain C

Receptor sequence
>5xm3C (length=596) Species: 1026882 (Methylophaga aminisulfidivorans MP) [Search protein sequence]
NDKLVELSKSNENWVMQGKDFSGTHYSTAKQINKDNVKKLRPSWSFSTGV
LNGHEGAPLVVNGTMYIHTPFPNNTFAIDLDEPGVIKWEHKPKQDPAARA
VACCDVVNRGLAYWPGDDKAPAMIVKSLLDGHVVALNAETGEEYWKVENG
DISVGQTETAAPFVAKDLVIQGSSGAELGVRGYVTAYDIHTGEMVWRWYA
TGPDADVGLDKDFNKHNPHYGQKGLGTSTWEDNAWKIGGGTNWGWYAYDP
QLDMFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLETGLAKFGYQKTPHD
EWDYAGVNVMMLSEQKDKNGKMRKLLTHPDRNGIIYTLDRETGDLVSANK
MDDTANWVKKVDLETGLPIRDPEYGTRMGHRSRDVCPSAMGFHNQGFDSY
DPKRELFYLGINHLCMDWEPFMLPYRAGQFFVGANVWTYPGPKGDRQNGI
GSGQVKAYNAITGEFAWEKMEKFSVWGGTTATEGGLVFYGTLDGFIKARD
ADTGKLLWKFKLPSGVIGHPMTYTHKGTQYVAINYGVGGWPAVGLVFDLN
DPSAGLGAVGAFKELAKNTQMGGGVMVFSLDGKSPYDDVSLGEYGM
3D structure
PDB5xm3 The crystal structure of methanol dehydrogenase, a quinoprotein from the marine methylotrophic bacterium Methylophaga aminisulfidivorans MPT
ChainC
Resolution1.701 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) E208 N292 D334
Catalytic site (residue number reindexed from 1) E177 N261 D303
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 PQQ C E86 C134 C135 R140 T190 S205 G206 A207 E208 T272 W274 R362 N425 W507 G570 W571 E55 C103 C104 R109 T159 S174 G175 A176 E177 T241 W243 R331 N394 W476 G539 W540
BS02 MG C E208 N292 E177 N261
Gene Ontology
Molecular Function
GO:0005509 calcium ion binding
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors
Cellular Component
GO:0016020 membrane
GO:0030288 outer membrane-bounded periplasmic space

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Molecular Function
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Cellular Component
External links
PDB RCSB:5xm3, PDBe:5xm3, PDBj:5xm3
PDBsum5xm3
PubMed29492864
UniProtA3FJ48

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