Structure of PDB 5vsv Chain C

Receptor sequence
>5vsvC (length=343) Species: 1502 (Clostridium perfringens) [Search protein sequence]
RILKTAYTFDDVLLVPNKSEVLPNEVSLKTQLTKKIQLNIPLMSASMDTV
TESKMAIAMAREGGIGIIHKNMTIEDQAREVDRVKRSGGLLCGASIGVTN
DMMERVDAVVKAKVDVIVLDTAHGHSKGVIEGVKRIKAKYPELQVIAGNI
ATPEAVRDLAEAGADCVKVGIGPGSICTTRIVAGVGVPQLTAVMDCAEEG
KKLGIPVIADGGLKYSGDIVKALAAGACAAMMGSIFAGCEEAPGAIEIYQ
GRSYKVYRGMGSLGAMAKKFVPEGVEGRIAYKGHLADTIYQLIGGIKSGM
GYLGAPTLENLYENANFVVQTSAGFRESHPHDINITKEAPNYS
3D structure
PDB5vsv Crystal Structure of Inosine 5'-monophosphate Dehydrogenase from Clostridium perfringens Complexed with IMP and P225
ChainC
Resolution2.205 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 1.1.1.205: IMP dehydrogenase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 8KY C P25 S436 G439 Y440 P23 S298 G301 Y302
BS02 IMP C M49 G300 S301 I302 C303 D336 G338 S360 Y383 G385 M386 G387 E411 M47 G174 S175 I176 C177 D210 G212 S234 Y257 G259 M260 G261 E273
BS03 8KY C T247 A248 H249 M386 G387 M392 E411 T121 A122 H123 M260 G261 M266 E273
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0003938 IMP dehydrogenase activity
GO:0016491 oxidoreductase activity
Biological Process
GO:0006164 purine nucleotide biosynthetic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:5vsv, PDBe:5vsv, PDBj:5vsv
PDBsum5vsv
PubMed
UniProtA0A127ELD1

[Back to BioLiP]