Structure of PDB 5vrb Chain C

Receptor sequence
>5vrbC (length=615) Species: 521006 (Neisseria gonorrhoeae NCCP11945) [Search protein sequence]
SQLANVIRFLSADAVQKANSGHPGAPMGMAEMAETLWTKFLNHNPANPKF
YNRDRFVLSNGHASMLLYSLLHLTGYNLSIEDLKNFRQLHSKTPGHPEYG
YTDGVETTTGPLGQGIANAVGMALAEKILAAEFNKDGLNIVDHYTYVFMG
DGCLMEGVSHEACSLAGTLGLGKLIVLYDDNNDGWFTENIPQRFESYGWH
VVPNVNGHDTAAIQTAIEAARAETGKPSIICCKTLAPLIEATRKHLGWAY
PAFEIPQEIYDAWNAKEKGAKLEAGWNELFAQYQAKYPAEAAEFVRRMDK
KLPENFDEYVQTALKEVCAKNSIEILAKELPELVGGSADLTPSNLTDWSN
SVSVTRDKGGNYIHYGVREFGMGAIMNGLVLHGGVKPFGATFLMFSEYER
NALRMAALMKINPVFVFTHDSIGLGEDGPTHQPIEQTATLRLIPNMDVWR
PCDTAESLVAWAEAAKAEDHPSCLIFSRQARSEQQLNDIKRGAYVISEAQ
GNAQAVIIATGSEVGLAVEAQKVLAGQGIAVRVVSMPSTSVFDRQDAAYQ
AAVLPEGLPRIAVEAGHTNGWYKYVGLNGAVVGINRFGESAPADLLFKAF
GFTVDNVVDTVKSVL
3D structure
PDB5vrb Crystal structure of a transketolase from Neisseria gonorrhoeae
ChainC
Resolution1.85 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) H23 E408 Y437 H470
Catalytic site (residue number reindexed from 1) H22 E369 Y398 H431
Enzyme Commision number 2.2.1.1: transketolase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA C D152 N182 N183 D151 N181 N182
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0004802 transketolase activity
GO:0016740 transferase activity
GO:0046872 metal ion binding
Biological Process
GO:0006098 pentose-phosphate shunt
Cellular Component
GO:0005829 cytosol

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5vrb, PDBe:5vrb, PDBj:5vrb
PDBsum5vrb
PubMed
UniProtB4RKU9

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