Structure of PDB 5u9p Chain C

Receptor sequence
>5u9pC (length=255) Species: 216591 (Burkholderia cenocepacia J2315) [Search protein sequence]
HALDRFRLDGRRALITGSGRGIGLTLARGLAEAGAAIVINDRNEEKAATL
ARRFRDEGFAADHAVFDVAEHAQVRAAIDEFEARVGAIDILVNNAGIQRR
APLDAFEPDDWHALMRVNLDGVFNVAQAVARHMIARGHGKIINICSVQSE
LARPTIAPYAATKGAVRMLTKGMCADWARYGIQANGLAPGYFETELNRAL
VDDAAFSDWLCKRTPAGRWGQVDELCGAAIFLASAASDFVNGQTLFVDGG
LTSAV
3D structure
PDB5u9p Crystal structure of a gluconate 5-dehydrogenase from Burkholderia cenocepacia J2315 in complex with NADP and tartrate
ChainC
Resolution1.65 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) G23 S148 Y161 K165
Catalytic site (residue number reindexed from 1) G21 S146 Y159 K163
Enzyme Commision number 1.1.1.69: gluconate 5-dehydrogenase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 NAP C G19 R22 G23 I24 R44 D69 V70 N96 A97 G98 I146 Y161 K165 P191 G192 Y193 F194 T196 L198 N199 G17 R20 G21 I22 R42 D67 V68 N94 A95 G96 I144 Y159 K163 P189 G190 Y191 F192 T194 L196 N197
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0008874 gluconate 5-dehydrogenase activity
GO:0016491 oxidoreductase activity

View graph for
Molecular Function
External links
PDB RCSB:5u9p, PDBe:5u9p, PDBj:5u9p
PDBsum5u9p
PubMed
UniProtB4EEX4

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