Structure of PDB 5tx1 Chain C

Receptor sequence
>5tx1C (length=946) Species: 46928 (Human adenovirus 26) [Search protein sequence]
PSMMPQWAYMHIAGQDASEYLSPGLVQFARATDTYFSLGNKFRNPTVAPT
HDVTTDRSQRLTLRFVPVDREATTYLYKARFTLAVGDNRVLDMASTYFDI
RGVLDRGPSFKPYSGTAYNSLAPKGAPNPSQWETKEKQGTTGGVQQEKDV
TKTFGVAATGGINITNQGLLLGTDETAENGKKDIYADKTFQPEPQVGEEN
WQENEAFYGGRALKKDTKMKPCYGSFARPTNEKGGQAKFKPVNEGEQPKD
LDIDFAYFDVPGGSPPAGGSGEEYKADIILYTENVNLETPDTHVVYKPGT
SDNSSEINLVQQSMPNRPNYIGFRDNFVGLMYYNSTGNMGVLAGQASQLN
AVVDLQDRNTELSYQLLLDSLGDRTRYFSMWNSAVDSYDPDVRIIENHGV
EDELPNYCFPLNGTGTNSTYQGVKITNGNDGAEESEWEKDDAISRQNQIC
KGNVYAMEINLQANLWKSFLYSNVALYLPDSYKYTPANVKLPANTNTYEY
MNGRVVAPSLVDAYINIGARWSLDPMDNVNPFNHPRNAGLRYRSMLLGNG
RYVPFHIQVPQKFFAIKNLLLLPGSYTYEWNFRKDVNMILQSSLGNDLRV
DGASVRFDSVNLYATFFPMAHNTASTLEAMLRNDTHDQSFNDYLSAANML
YPIPAKATNVPISIPSRNWAAFRGWSFTRLKTKETPSLGSGFDPYFVYSG
SIPYLDGTFYLNHTFKKVSIMFDSSVSWPGNDRLLTPNEFEIKRSVDGEG
YNVAQCNMTKDWFLVQMLSHYNIGYQGFHVPEGYKDRMYSFFRNFQPMSR
QVVDEINYKDYKAVTLPFQHNNSGFTGYLAPTMRQGQPYPANFPYPLIGQ
TAVPSVTQKKFLCDRVMWRIPFSSNFMSMGALTDLGQNMLYANSAHALDM
TFEVDPMDEPTLLYLLFEVFDVVRVHQPHRGVIEAVYLRTPFSAGN
3D structure
PDB5tx1 Cryo-EM structure of human adenovirus D26 reveals the conservation of structural organization among human adenoviruses.
ChainC
Resolution3.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide C S21 L24 V29 Q30 R33 A34 T35 Y38 G42 F45 R46 N47 S18 L21 V26 Q27 R30 A31 T32 Y35 G39 F42 R43 N44
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
Biological Process
GO:0046718 symbiont entry into host cell
GO:0075521 microtubule-dependent intracellular transport of viral material towards nucleus
Cellular Component
GO:0019028 viral capsid
GO:0039623 T=25 icosahedral viral capsid
GO:0042025 host cell nucleus
GO:0043657 host cell

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5tx1, PDBe:5tx1, PDBj:5tx1
PDBsum5tx1
PubMed28508067
UniProtQ3S8B3

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