Structure of PDB 5t9g Chain C

Receptor sequence
>5t9gC (length=811) Species: 820 (Bacteroides uniformis) [Search protein sequence]
SDFNNGWKFTLSDSVCYSFVNYNPSSWKTVNLPHDWSVDLPFESTAEGCT
GFLKGGIGWYSKTFDTPDNFVDKKCYIVFDGVYNNSEYWINGRKLGFHPY
GYSPFFYDISDYLNPKGQENRISVRIDHSRYADSRWYTGSGIYRETQLIF
TDKLHIPVWGTFVTTPVVSSERATVNIEVRVKNDYSGPRAGEVRTSYFDS
KNKKVGEKLTSFLIEAGKEMKINQSVEISNPSLWDVDSPSMYLAKSEILV
DGNVVDTKETPFGIRSIKFDAKKGFFLNGKNMKIKGVCLHHDASMIGAAL
VEDVWRRRLQTLKDGGCNAIRLSHNPGADAFLELCDEMGFLVQEEFFDEW
DYPKDKRLNMDEQSIDYITRGYCEYFQEWAERDLKNVMLRSRNHPCIFQW
SIGNEIEWTYKGCKESTGFFSYFWNQPPYSTQRIREEWAKQPKQTYDIGR
TAKKLAAWTREMDTTRPVTANCILPSISYETGYIDALDVAGFSYRRVMYD
YAHKNYPDKPAMGTENLGQWHEWKAVIERDYIPGMFIWTGVDYLGEVGTK
GREWPQRAIGCGLLDLAGFEKPSFHMMKSLWTDAPFIAIYSQTANKSSYV
EKDGKFTDKDPKKPWTQRLWVWEDVNSHWNYTKGEKVVVEIYSNCDEIEL
FQNGKSLGKRFLKDFEDHIYKWSVDFKDGNIVAKGKKNGKKTTSAIYTTK
ETNSIKLSVDKVAVDANNTDVIHVTAQLIDRNGRNISWEEKEITFNIGGN
YRLLGVENGDHLNVLNYKSNTVKTYKGRALLVLQATDKAGILNINANSGS
ISSNDLKVEVK
3D structure
PDB5t9g Molecular basis of an agarose metabolic pathway acquired by a human intestinal symbiont.
ChainC
Resolution2.4 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) R166 D382 Y536 E552 C598
Catalytic site (residue number reindexed from 1) R135 D351 Y499 E515 C561
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GIF C R166 H355 E436 E552 W575 E583 R135 H324 E405 E515 W538 E546
Gene Ontology
Molecular Function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016798 hydrolase activity, acting on glycosyl bonds
Biological Process
GO:0005975 carbohydrate metabolic process

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Molecular Function
View graph for
Biological Process
External links
PDB RCSB:5t9g, PDBe:5t9g, PDBj:5t9g
PDBsum5t9g
PubMed29535379
UniProtA0A2D0TCC9

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