Structure of PDB 5onb Chain C

Receptor sequence
>5onbC (length=268) Species: 9606 (Homo sapiens) [Search protein sequence]
EREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSFGTIAALL
QEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPL
FLYPFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLC
LRIMESGSELSKTVATFILQKILLDDTGLAYICQTYERFSHVAMILGKMV
LQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKDTTFAQVLK
DDTTTKRWLAQLVKNLQE
3D structure
PDB5onb DrosophilaBag-of-marbles directly interacts with the CAF40 subunit of the CCR4-NOT complex to elicit repression of mRNA targets.
ChainC
Resolution3.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide C H85 N88 R130 E133 Y134 L137 G141 G144 V181 F184 K230 H231 H68 N71 R113 E116 Y117 L120 G124 G127 V164 F167 K213 H214
Gene Ontology
Biological Process
GO:0006402 mRNA catabolic process
Cellular Component
GO:0030014 CCR4-NOT complex

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Biological Process
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Cellular Component
External links
PDB RCSB:5onb, PDBe:5onb, PDBj:5onb
PDBsum5onb
PubMed29255063
UniProtQ92600|CNOT9_HUMAN CCR4-NOT transcription complex subunit 9 (Gene Name=CNOT9)

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