Structure of PDB 5kxb Chain C

Receptor sequence
>5kxbC (length=238) Species: 3922 (Wisteria floribunda) [Search protein sequence]
KETTSFVFTRFSPDPQNLLLQGDTVVTSSGHLQLTQVKDGEPVYSSLGRA
LYYAPIHIWDSNTDTVANFVTSFSFVIDAPNKAKAADGLAFFLAPVDTEP
QKPGGLLGLFHDDRHNKSNHIVAVEFDTFKNSWDPEGTHIGINVNSIVSR
KTISWDLENDEVANVVISYQASTKTLTASLVYPSSSTSYILNDVVDLKQI
LPEYVRVGFTAASGLSKDHVETHDVLAWTFDSDLPDPS
3D structure
PDB5kxb Molecular Basis for Recognition of the Cancer Glycobiomarker, LacdiNAc (GalNAc[ beta 14]GlcNAc), by Wisteria floribunda Agglutinin.
ChainC
Resolution2.33 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 CA C D157 F159 N161 D164 D127 F129 N131 D134
BS02 MN C E155 D157 D164 H169 E125 D127 D134 H139
Gene Ontology
Molecular Function
GO:0030246 carbohydrate binding
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:5kxb, PDBe:5kxb, PDBj:5kxb
PDBsum5kxb
PubMed27601469
UniProtA0A1D5B395

[Back to BioLiP]