Structure of PDB 5jyg Chain C

Receptor sequence
>5jygC (length=328) Species: 342108 (Paramagnetospirillum magneticum AMB-1) [Search protein sequence]
LGIDLGTSHTAVMSSRGKKFLLKSVVGYPKDVIGLKLLGRPYVVGDEAFE
MRSYLDIRYPLQDGVLSEISDRDIEVARHLLTHVVKSAEPGPNDEICAVI
GVPARASAANKALLLKMAQEVVHTALVVSEPFMVGYGLDKLINTIIVDIG
AGTTDICALKGTVPGPEDQVTLTKAGNYVDERLQNAILERHPELQMNVNV
ACAVKEQFSFVGTPTEVASFEFRAAGKPVRADVTEPVKIACEALMPDIIE
SIETLLRSFQPEYQATVLQNIVFAGGGSRIRGLAAYVKEKLRPFGDANVT
CVKDPTFDGCRGALRLAEELPPQYWRQL
3D structure
PDB5jyg Structure of the magnetosome-associated actin-like MamK filament at subnanometer resolution.
ChainC
Resolution6.5 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.6.1.-
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 ADP C T20 S21 G163 A164 K218 E219 G289 T7 S8 G150 A151 K205 E206 G276
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0005525 GTP binding
GO:0016787 hydrolase activity
GO:0016887 ATP hydrolysis activity
GO:0046872 metal ion binding
Biological Process
GO:0140923 magnetosome assembly
Cellular Component
GO:0005737 cytoplasm
GO:0005856 cytoskeleton
GO:0016020 membrane
GO:0110143 magnetosome
GO:0110146 magnetosome membrane

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:5jyg, PDBe:5jyg, PDBj:5jyg
PDBsum5jyg
PubMed27391173
UniProtQ2W8Q6|MAMK_PARM1 Actin-like protein MamK (Gene Name=mamK)

[Back to BioLiP]