Structure of PDB 5jm6 Chain C

Receptor sequence
>5jm6C (length=445) Species: 209285 (Thermochaetoides thermophila) [Search protein sequence]
RPEHFTQPYLDFMTHNPTVFHVVDYCKQKLLKAGYVELPARDSWTGKLVP
GGKYFTTRNGSSIIAFTVGQAYKPGNGIAMIAGHIDALTARLKPTSVKPT
KEGYVQLGVAQYAGALNETWWDRDLSVGGRVIVKDPKTGKTTVKLVKVDW
PVARIPTLAPHFGIGMTGHGNRETEMVPVIGIDNSDLPVGKPGSFASTQP
PKLVKLILSQLGLSDPDSILNWELELFDAQPATVGGLDKEFIFAGRIDDK
LCSWAAFMALLHAKRAPTDGVIKLVALFDDEEIGSLLRQGARGNFLPITI
ERILESFCSSNSVPFGPGILGQTYARSFLVSSDVTHAAHPNFTQTNLPGH
SPRLNVGVALCVDTTDSVSMAILDRIAELSGCVNQRHMIGPMLSAAMGVK
AADVGIPQLSMHSIRAMTGSLDPGLGVKFYKGFLDFWEEVDLEWS
3D structure
PDB5jm6 Higher-order assemblies of oligomeric cargo receptor complexes form the membrane scaffold of the Cvt vesicle.
ChainC
Resolution2.758 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN C D306 E340 H485 D248 E282 H412
BS02 ZN C H133 D306 D391 H84 D248 D333
Gene Ontology
Molecular Function
GO:0004177 aminopeptidase activity
GO:0008237 metallopeptidase activity
GO:0008270 zinc ion binding
GO:0046872 metal ion binding
GO:0070006 metalloaminopeptidase activity
Biological Process
GO:0006508 proteolysis
Cellular Component
GO:0000324 fungal-type vacuole

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:5jm6, PDBe:5jm6, PDBj:5jm6
PDBsum5jm6
PubMed27266708
UniProtG0SG74

[Back to BioLiP]