Structure of PDB 5jdi Chain C

Receptor sequence
>5jdiC (length=240) Species: 5702 (Trypanosoma brucei brucei) [Search protein sequence]
APAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKER
SNTAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPL
VQKTVETQVAELIGTNAIAPFLLTMSFAQRQNLSIVNLCDAMVDQPCMAF
SLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSEEEKDKWRRKVPLG
RREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLVHA
3D structure
PDB5jdi Profiling of Flavonol Derivatives for the Development of Antitrypanosomatidic Drugs.
ChainC
Resolution1.38 Å
3D
structure
Catalytic site residues are labeled in the structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Catalytic site (original residue number in PDB) R14 D161 Y174 K178
Catalytic site (residue number reindexed from 1) R12 D140 Y153 K157
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 NAP C R14 I15 Y34 H35 N36 S37 D62 L63 N93 A94 S95 T126 L159 D161 K178 P204 G205 S207 R12 I13 Y32 H33 N34 S35 D60 L61 N91 A92 S93 T115 L138 D140 K157 P183 G184 S186
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0016491 oxidoreductase activity
GO:0047040 pteridine reductase activity

View graph for
Molecular Function
External links
PDB RCSB:5jdi, PDBe:5jdi, PDBj:5jdi
PDBsum5jdi
PubMed27411733
UniProtO76290

[Back to BioLiP]