Structure of PDB 5iv8 Chain C

Receptor sequence
>5iv8C (length=543) Species: 573 (Klebsiella pneumoniae) [Search protein sequence]
SGFLIPNAKYSTKNGVEFSLPYYWNIAPNFDATITPHYMNKRGGVMWENE
FRYLTQLGSGLTEFDYLPSDKVYEDDHSSDSNSRRWLFYWNHSGVIDQVW
RLNADYTKVSDPDYFNDFSSKYGSSTDGYATQKFSAGYVNQNFDATVSTK
QFQVFDRESSNSYSAEPQLDVNYYQNDVGPFDTHLYGQVAHFVNSNNNMP
EATRVHFEPTINLPLSNGWGSLNTEAKLLATHYQQSNLDKYNAANGTDYK
ESVSRVMPQFKVDGKMVFERDLQEGFTQTLEPRVQYLYVPYRDQSEIGNY
DSTLLQSDYTGLFRDRTYSGLDRIASANQVTTGLTSRVYDAAAVERFNIS
VGQIYYFTESRTGDDNINWENNDTTGSLVWAGDTYWRIADEWGLRGGIQY
DTRLDNVATGNGTIEYRRDENRLVQLNYRYASPEYIQATLPSYSTAAQYK
QGISQVGMTASWPIVDRWSVVGAYYYDTNTRKAANQMLGVQYNSCCYAIR
LGYERKVNGWNSNDNGGESKYDNTFGINIQMLRSNILPYQSSL
3D structure
PDB5iv8 Structural and Functional Characterization of the LPS Transporter LptDE from Gram-Negative Pathogens.
ChainC
Resolution2.938 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 C8E C L446 T448 L222 T224
BS02 C8E C Y510 N552 Y286 N328
BS03 C8E C N441 W443 N217 W219
BS04 C8E C S440 N441 G444 S445 V508 S216 N217 G220 S221 V284
Gene Ontology
Biological Process
GO:0015920 lipopolysaccharide transport
GO:0043165 Gram-negative-bacterium-type cell outer membrane assembly
GO:0061024 membrane organization
Cellular Component
GO:0009279 cell outer membrane
GO:0019867 outer membrane

View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:5iv8, PDBe:5iv8, PDBj:5iv8
PDBsum5iv8
PubMed27161977
UniProtC4T9I0

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